Zoltán Toroczkai

| Last Updated: Feb. 11, 2018

Journal Articles (peer reviewed)

97.	P.L. Erdős, S.R. Kharel, T.R. Mezei, Z. Toroczkai
	Degree-preserving graph dynamics -- a versatile process to construct random networks
	submitted , (2022). \| arXiv: 2111.11994

96.	F. Molnár,, A.R. Ribeiro Gomes, Sz. Horvát, M. Ercsey-Ravasz, K. Knoblauch, H. Kennedy and Z. Toroczkai
	Predictability of cortico-cortical connections in the mammalian brain
	to be submitted , (2022). \| bioRxiv:10.1101/2020.12.03.410803v1

95.	S.R. Kharel, T.R. Mezei, S. Chung, P.L. Erdős and Z. Toroczkai.
	Degree-preserving network growth
	Nature Physics 18(1), 100-106 (2022). \| doi: 10.1038/s41567-021-01417-7

94.	É. Czabarka, L.A. Székely, Z. Toroczkai, S. Walker
	An algebraic Monte-Carlo algorithm for the Bipartite Partition Adjacency Matrix realization problem.
	Algebraic Statistics 12(2), 1150124 (2021). \| doi: 10.2140/astat.2021.12.115 \| arXiv:1708.08242 [math.CO]

93.	S. Dutta, A. Khanna, H. Paik, D. Schlom, A. Raychowdhury, Z. Toroczkai, S. Datta
	Ising Hamiltonian Solver using Stochastic Phase-Transition Nano-Oscillators
	Nature Electronics 4 502-512 (2021). \| doi: 10.1038/s41928-021-00616-7 \| arXiv:2007.12331 [cond-mat.mes-hall]

92.	F. Molnár, S. R. Kharel, X. Hu, Z. Toroczkai
	Accelerating a continuous-time analog SAT solver using GPUs
	Computer Physics Communications 256 107469 (2020). \| doi: 10.1016/j.cpc.2020.107469

91.	S. Dutta, A. Khanna, J. Gomez, K. Ni, Z. Toroczkai, S. Datta.
	Experimental Demonstration of Phase Transition Nano-Oscillator Based Ising Machine.
	2019 IEEE International Electron Devices Meeting (IEDM19), San Francisco, CA, USA, 37.8.1-37.8.4 (2019). \| doi: 10.1109/IEDM19573.2019.8993460

90.	H. Yamashita, H. Suzuki, Z. Toroczkai and K. Aihara.
	Bounded Continuous-Time Satisfiability Solver
	Proceedings of the 2019 International Symposium on Nonlinear Theory and its Applications (NOLTA2019) 436-439 (2019). \| access paper here

89.	B. Molnár, F. Molnár, M. Varga, Z. Toroczkai, M. Ercsey-Ravasz.
	A continuous-time Max-SAT solver with high analog performance.
	Nature Communications, 9, 4864 (2018). \| doi:10.1038/s41467-018-07327-2

88.	R. Gamanut, H. Kennedy, Z. Toroczkai, M. Ercsey-Ravasz, D.C. Van Essen, K. Knoblauch and A. Burkhalter.
	The Mouse Cortical Connectome, Characterized by an Ultra-Dense Cortical Graph, Maintains Specificity by Distinct Connectivity Profiles
	Neuron 97, 698-715 (2018). \| doi:10.1016/j.neuron.2017.12.037

87.	P.L. Erdős, I. Miklós, Z. Toroczkai.
	New classes of degree sequences with fast mixing swap Markov chain sampling.
	Combinatorics Probability and Computing 27(2), 186-207 (2018). \| doi:10.1017/S0963548317000499 \| arXiv:1601.08224 [cs.DM, math.CO]

86.	X.Yin, B. Sedighi, M. Varga, M. Ercsey-Ravasz, Z. Toroczkai, X. S. Hu.
	Efficient analog circuits for Boolean Satisfiability.
	IEEE Transactions on Very Large Scale Integration Systems (TVLSI), 16(1), 155-167 (2018). \| doi:10.1109/TVLSI.2017.2754192 \| arXiv:1606.07467 [cs.CC]

85.	H.R. Noori, J. Schöttler, M. Ercsey-Ravasz, A. Cosa-Linan, M. Varga, Z. Toroczkai, R. Spanagel.
	A Multi-scale Cerebral Neurochemical Connectome of the Rat Brain.
	PLOS Biology 15(7), e2002612 (2017). \| doi:10.1371/journal.pbio.2002612

84.	Sz. Horváth, R. Gămănuț, M. Ercsey-Ravasz, L. Magrou, B. Gămănuț, D.C. Van Essen, A. Burkhalter, K. Knoblauch, Z. Toroczkai, H. Kennedy.
	Spatial Embedding and Wiring Cost Constrain the Functional Layout of the Cortical Network of Rodents and Primates
	PLOS Biology 14(7), e1002512 (2016). \| doi:10.1371/journal.pbio.1002512

83.	M. Varga, R. Sumi, Z. Toroczkai, M. Ercsey-Ravasz.
	Order-to-chaos transition in the hardness of random Boolean satisfiability problems.
	Phys. Rev. E 93, 052211 (2016). \| arXiv:1602.05152 [cs.CC, cond-mat.stat-mech]

82.	C. Orsini, M.M. Dankulov, P. Colomer-de-Simon, A. Jamakovic, P. Mahadevan, A. Vahdat, K.E. Bassler, Z. Toroczkai, M. Boguna, G. Caldarelli, S. Fortunato, D. Krioukov
	Quantifying randomness in real networks.
	Nature Communications 6, 8627 (2015). \| doi:10.1038/ncomms9627 \| arXiv:1505.07503 [physics.soc-ph]

81.	K.E. Bassler, C.I. Del Genio, P.L. Erdős, I. Miklós, Z. Toroczkai.
	Exact sampling of graphs with prescribed degree correlations.
	New J. Phys. 17, 083052 (2015). \| doi:10.1088/1367-2630/17/8/083052 \| arXiv:1503.06725 [cs.DM, cond-mat.stat-mech, cs.DS, math.CO, physics.soc-ph]

80.	Sz. Horvát, É. Czabarka and Z. Toroczkai.
	Reducing Degeneracy in Maximum Entropy Models of Networks.
	Phys. Rev. Lett. 114, 158701 (2015). \| doi:10.1103/PhysRevLett.114.158701 \| arXiv:1407.0991 [cond-mat.stat-mech]

79.	P. L. Erdős, I. Miklós and Z. Toroczkai.
	A decomposition based proof for fast mixing of a Markov chain over balanced realizations of a joint degree matrix.
	SIAM J. Discr. Math. 29(1), 481-499 (2015). \|doi:10.1137/130929874 \| arxiv:1307.5295 [math.CO]

78.	Y. Ren, M. Ercsey-Ravasz, P. Wang, M.C. Gonzalez, Z. Toroczkai.
	Predicting flows in spatial networks using a radiation model based on temporal ranges.
	Nature Communications 5, 5347 (2014). \|doi: 10.1038/ncomms6347 \|arXiv:1410.4849 [physics.soc-ph]

77.	N.T. Markov, M.M. Ercsey-Ravasz, A.R. Ribeiro Gomes, C. Lamy, L. Magrou, J. Vezoli, P. Misery, A. Falchier, R. Quilodran, M. A. Gariel, J. Sallet, R. Gamanut, C. Huissoud, S. Clavagnier, P. Giroud, D. Sappey-Marinier, P. Barone, C. Dehay, Z. Toroczkai, K. Knoblauch, D. C. Van Essen and H. Kennedy.
	A weighted and directed interareal connectivity matrix for macaque cerebral cortex.
	Cereb. Cortex, 24(1) 17-36 (2014)

76.	N.T. Markov, M. Ercsey-Ravasz, D.C. Van Essen, K. Knoblauch, Z. Toroczkai and H. Kennedy.
	Cortical high-density counter-stream architectures.
	Science 342(6158), 1238406 (2013).

75.	M. Ercsey-Ravasz, N.T. Markov, C. Lamy, D.C. Van Essen, K. Knoblauch, Z. Toroczkai, and H. Kennedy.
	A predictive network model of cerebral cortical connectivity based on a distance rule.
	Neuron 80(1), 184-197 (2013).

74.	H. Kennedy, K. Knoblauch and Z. Toroczkai.
	Data coherence and completion actually do count for interareal cortical network
	Neuroimage 80, 37-45 (2013).

73.	N.T. Markov, M. Ercsey-Ravasz, C. Lamy, A.R. Ribeiro Gomes, L. Magrou, P. Misery, P. Giroud, P. Barone, C. Dehay, Z. Toroczkai, K. Knoblauch, D.C. Van Essen, H. Kennedy.
	The role of distance on the specicity of inter-areal connectivity in the macaque cerebral cortex
	Proc. Natl. Acad. Sci. USA 110(13), 5187-5192 (2013).

72.	C. Wang, O. Lizardo, D. Hachen, A. Strathman, Z. Toroczkai, and N. V. Chawla. (2013) in press.
	A dyadic reciprocity index for repeated interaction networks.
	Network Science (CUP) 1(01), 31-48 (2013).

71.	M. Ercsey-Ravasz and Z. Toroczkai
	The Chaos Within Sudoku.
	Scientific Reports 2, 725 (2012). \| doi:10.1038/srep00725 arxiv.org: 1208.0370

70.	M. Ercsey-Ravasz, R. Lichtenwalter, N.V. Chawla and Z. Toroczkai
	Range-limited centrality measures in non-weighted and weighted complex networks
	Phys. Rev. E. 85, 066103 (2012). arxiv.org/1111.5382

69.	M. Ercsey-Ravasz, Z. Toroczkai, Z. Lakner and J. Baranyi.
	Complexity of the International Agro-Food Trade Network and its Impact on Food Safety.
	PLoS ONE 7(5), e37810 (2012). doi:10.1371/journal.pone.0037810 .

68.	H. Kim, C.I. Del Genio, K.E. Bassler and Z. Toroczkai
	Constructing and sampling directed graphs with given degree sequence
	New J. Phys. 14, 023012 (2012). arxiv.org/1109.4590

67.	M. Ercsey-Ravasz and Z. Toroczkai
	Optimization hardness as transient chaos in an analog approach to constraint satisfaction.
	Nature Physics 7, 966-970 (2011) \| doi:10.1038/nphys2105, cover-page article. arxiv.org: 1208.0526v1

66.	N.T. Markov, P. Misery, A. Falchier, C. Lamy, J. Vezoli, R. Quilodran, P. Giroud, M.A. Gariel, M. Ercsey-Ravasz, L.J. Pilaz, C. Huissoud, P. Barone, C. Dehay, Z. Toroczkai, D.C. Van Essen, H. Kennedy, K. Knoblauch
	Weight concistency specifies regularities of cortical networks.
	Cereb Cortex 21, 1254-1272 (2011) doi:10.1093/cercor/bhq201

65.	A. Asztalos and Z. Toroczkai
	Network discovery by generalized random walks
	Europhysics Letters 92, 50008 (2010).

64.	M. Ercsey-Ravasz and Z. Toroczkai
	Centrality scaling in large networks
	Phys. Rev. Lett. 105, 038701 (2010).

63.	C.I. Del Genio, H. Kim, Z. Toroczkai and K.E. Bassler
	Efficient and exact sampling of simple graphs with given arbitrary degree sequence
	PLoS ONE 5(4), e10012 (2010). doi:10.1371/journal.pone.0010012.

62.	P.L. Erdös, I. Miklós, Zoltán Toroczkai
	A simple Havel-Hakimi type algorithm to realize graphical degree sequences of directed graphs
	The Electronic Journal of Combinatorics 17(1), R66 (2010).

61.	H. Kim, Z. Toroczkai, I. Miklós, P.L. Erdös and L. Székely
	Degree-based graph construction
	J. Phys. A: Math. Theor. 42, 392001 (2009). Fast Track Communication.

60.	A.L. Pastore y Piontti, C.E. La Rocca, Z. Toroczkai, L.A. Braunstein, P.A. Macri and E.D. López
	Using relaxational dynamics to reduce network congestion
	New J. Phys. 10, 093007 (2008).

59.	Z. Toroczkai, B. Kozma, K.E. Bassler, N.W. Hengartner, G. Korniss
	Gradient networks
	J. Phys. A: Math. Theor. 41, 155103 (2008).

58.	A.E. Motter, Z. Toroczkai
	Introduction: Optimization in networks
	Chaos 17, 026101 (2007).

57.	H. Guclu, G. Korniss, Z. Toroczkai
	Extreme fluctuations in noisy task-completion landscapes on scale-free networks
	Chaos 17, 026104 (2007).

56.	S. Sreenivasan, R. Cohen, E. Lopez, Z. Toroczkai, H.E. Stanley
	Structural bottlenecks for communication in networks
	Phys.Rev.E. 75, 036105 (2007).

55.	Z. Toroczkai, H. Guclu
	Proximity Networks and Epidemics
	Physica A 378, 68 (2007).

54.	B. Danila, Y. Yu, S. Earl, J.A. Marsh, Z. Toroczkai, K.E. Bassler
	Congestion-gradient driven transport on complex networks
	Phys.Rev.E 74, 046114 (2006).

53.	H. Guclu, G. Korniss, M. A. Novotny, Z. Toroczkai, and Z. Rácz
	Synchronization landscapes in small-world-connected computer networks
	Phys.Rev.E 73, 066115 (2006).

52.	Z. Toroczkai and S. Eubank
	Agent-based Modeling as a Decision Making Tool: How to Halt a Smallpox Epidemic. Frontiers of Engineering, The National Academies
	Frontiers of Engineering, Reports on Leading-edge Engineering from the 2005 Symposium, National Academy of Engineering, 99-107 (2005); reprinted as feature article in The Bridge 35(4), 22 (2005);

51.	Z. Toroczkai and K.E. Bassler
	Network Dynamics: Jamming is Limited in Scale-free Systems
	Nature 428, 716 (2004).

50.	S. Eubank, H. Guclu, V.S.A. Kumar, M. Marathe, A. Srinivasan, Z. Toroczkai, N. Wang
	Modelling disease outbreaks in realistic urban social networks
	Nature 429, 180 (2004).

49.	T. Tél, T. Nishikawa, A.E. Motter, C. Grebogi, and Z. Toroczkai.
	Universality in active chaos
	Chaos 14, 72 (2004).

48.	M. Anghel, Z. Toroczkai, K.E. Bassler, G. Korniss
	Competition-driven Network Dynamics: Emergence of a Scale-free Leadership Structure and Collective Efficiency
	Phys.Rev.Lett. 92, 058701 (2004).

47.	I.J. Benczik, Z. Toroczkai and T. Tél
	Advection of Finite-size Particles in Open Flows
	Phys.Rev.E. 67, 036303 (2003).

46.	I. Scheuring, T. Czárán, P. Szabó, G. Károlyi, and Z. Toroczkai
	Spatial models of prebiotic evolution: soup before pizza?
	Origins of Life and Evolution of the Biosphere 3, 319 (2003).

45.	G. Korniss, M.A. Novotny, H. Guclu, Z. Toroczkai, P.A. Rikvold
	Suppressing Roughness of Virtual Times in Parallel Discrete-Event Simulations
	Science 299, 677 (2003).

44.	I.Scheuring, G.Károlyi, Z. Toroczkai, T. Tél, and Á. Péntek
	Competing populations in flows with chaotic mixing
	Theor.Pop.Biol. 63(#2), 77 (2003).

43.	J.M. Finn, J.D. Goette, Z. Toroczkai, M. Anghel and B.P. Wood
	Estimation of Entropies and Dimensions by Nonlinear Symbolic Time Series Analysis
	Chaos 13(#2), 444 (2003).

42.	I.J. Benczik, Z. Toroczkai and T. Tél.
	Selective Sensitivity of Open Chaotic Flows on Inertial Tracer Advection: Catching Particles with a Stick
	Phys.Rev.Lett. 89, 164501 (2002).

41.	S. Das Sarma, P.P. Chatraphorn, Z. Toroczkai
	Universality class of discrete solid-on-solid limited mobility nonequilibrium growth models for kinetic surface roughening
	Phys.Rev.E 65, 0366144 (2002).

40.	Z. Toroczkai, T. Tél
	Introduction: Active chaotic flow.
	Chaos 12(2), 372 (2002).

39.	Z. Toroczkai
	Topological classification of the Horton-Strahler index on binary trees
	Phys.Rev.E 65, 016130 (2001).

38.	G. Korniss, M.A. Novotny, P.A. Rikvold, H. Guclu and Z. Toroczkai
	Going Through Rough Times: from Non-equilibrium Surface Growth to Algorithmic Scalability
	Materials Research Society Symposium Proceedings Series 700, 297 (2002).

37.	G. Santoboni, T. Nishikawa, Z. Toroczkai and C. Grebogi
	Autocatalytic reactions of phase distributed active particles
	Chaos 12, 408 (2002).

36.	M. Chertkov, I. Gabitov, P. Lushnikov, J. Moeser, and Z. Toroczkai
	Pinning method of pulse confinement in optical fiber with random dispersion
	J.Opt.Soc.Am. B 19, 42538 (2002).

35.	T. Nishikawa, Z. Toroczkai, C. Grebogi and T. Tél
	Finite size effects on active chaotic advection
	Phys.Rev.E 65, 026216 (2002).

34.	P. Punyindu, Z. Toroczkai, S. Das Sarma
	Epitaxial Mounding in Limited-Mobility Models of Surface Growth
	Phys.Rev.B 64, 205407 (2001).

33.	Z. Toroczkai, G. Károlyi, Á. Péntek, T. Tél and I. Scheuring
	Autocatalytic Reactions in Systems with Hyperbolic Mixing: Exact Results for the Active Baker Map
	J.Phys.A: Math.Gen. 34, 5215 (2001).

32.	Z. Toroczkai, G. Korniss
	Comment on "Extremal-Point densities of interface fluctuations in a quenched random medium"
	Phys.Rev.E 64, 048101 (2001).

31.	T. Nishikawa, Z. Toroczkai, and C. Grebogi
	Advective coalescence in chaotic flows
	Phys.Rev.Lett. 87, 038301 (2001).

30.	I. Miklós and Z. Toroczkai
	An improved model for statistical alignment
	Lecture Notes In Computer Science 2149, 1 (2001).

29.	G. Károlyi, Á. Péntek, I. Sheuring, T. Tél, and Z. Toroczkai
	Chaotic flow: the physics of species coexistence
	Proc. Natl. Acad. Sci. USA 97, 13661 (2000).

28.	I. Sheuring, G. Károlyi, Á. Péntek, T. Tél, Z. Toroczkai
	A model for resolving the plankton paradox: coexistence in open flows
	Freshwater Biology 45, 123 (2000).

27.	Z. Toroczkai, G. Korniss, S. Das Sarma, R. K. P. Zia
	Extremal-point densities of interface fluctuations
	Phys.Rev.E 62, 276 (2000).

26.	G. Korniss, Z. Toroczkai, M.A. Novotny, P.A. Rikvold
	From massively parallel algorithms and fluctuating time horizons to non-equilibrium surface growth
	Phys.Rev.Lett. 84, 1351 (2000).

25.	S. Das Sarma, P. Punyindu, Z.Toroczkai
	Nonuniversal mound formation in nonequilibrium surface growth
	Surf. Sci. Letters 457, L369 (2000).

24.	T. Tél, G. Károlyi, Á. Péntek, I. Sheuring, Z. Toroczkai, C. Grebogi, J. Kadtke
	Chaotic advection, diffusion, and reactions in open flows
	Chaos 10, 89 (2000).

23.	Z. Toroczkai, E.D. Williams
	Nanoscale fluctuations at solid surfaces
	Physics Today 52, 24 (1999).

22.	G. Károlyi, Á. Péntek, I. Sheuring, T. Tél, Z. Toroczkai, C. Grebogi, J. Kadtke
	Fractality, chaos, and reactions in imperfectly mixed open hydrodynamical flows
	Physica A 274, 120 (1999).

21.	Z. Toroczkai, T. J. Newman, S. Das Sarma
	Sign-time distributions for interface growth
	Phys.Rev.E. 60, R1115 (1999).

20.	G. Károlyi, Á. Péntek, Z. Toroczkai, T. Tél, C. Grebogi
	Chemical or biological activity in open chaotic flows
	Phys.Rev.E. 59, 5468 (1999).

19.	T. J. Newman, Z. Toroczkai
	Diffusive persistence and the "sign-time" distribution
	Phys.Rev.E. 58, R2685 (1998).

18.	R.K.P. Zia, Z. Toroczkai
	Random walk with a hop-over site: A novel approach to tagged diffusion and its applications
	J.Phys.A: Math.Gen. 31, 9667 (1998).

17.	Z. Toroczkai, G. Károlyi, T. Tél, Á. Péntek, C.Grebogi
	Advection of active particles in open chaotic flows
	Phys. Rev. Lett. 80, 500 (1998).

16.	Z. Toroczkai, G. Korniss, B. Schmittmann, R.K.P. Zia
	Brownian-vacancy mediated disordering dynamics
	Europhys.Lett. 40, 281 (1997).

15.	Z. Toroczkai
	The Brownian vacancy driven walk
	Int. J. Mod. Phys. B 11, 3343 (1997).

14.	Z. Toroczkai, R.K.P. Zia
	Periodic one-dimensional hopping model with one mobile directional impurity
	J. Stat. Phys. 87, 545 (1997).

13.	Z. Toroczkai, G. Károlyi, Á. Péntek, T. Tél, C. Grebogi, J.A. Yorke
	Wada dye boundaries in open hydrodynamical flows
	Physica A239, 235 (1997).

12.	Á. Péntek, T. Tél, Z. Toroczkai
	Transient chaotic mixing in open hydrodynamical flows
	Int. J. Bif. Chaos 6, 2619 (1996).

11.	Á. Péntek, J.B. Kadtke, Z. Toroczkai
	Stabilizing chaotic vortex trajectories: An example of high dimensional control
	Phys. Lett. A224, 85 (1996).

10.	Z. Toroczkai, R.K.P. Zia
	A model for electrophoresis of polymers with impurities: Exact distribution for a steady state
	Phys. Lett. A217, 97 (1996).

9.	B. Sass, Z. Toroczkai
	Continuous extension of the geometric control method
	J. Phys. A: Math.Gen. 29, 3545 (1996).

8.	Á. Péntek, Z. Toroczkai, T. Tél, C. Grebogi, J.A. Yorke
	Fractal boundaries in open hydrodynamical flows:Signatures of chaotic saddles
	Phys. Rev. E 51, 4076 (1995).

7.	Á. Péntek, Z. Toroczkai
	Chaotic advection in the velocity field of leapfrogging vortex pairs
	J. Phys. A: Math.Gen. 28, 2191 (1995).

6.	Á. Péntek, Z. Toroczkai
	Fractal tracer patterns in open hydrodynamical flows: The case of leapfrogging vortex pairs
	Fractals 3, 33 (1995).

5.	Z. Toroczkai
	Geometric method for stabilizing unstable periodic orbits
	Phys. Lett. A190, 71 (1994).

4.	Á. Péntek, Z. Toroczkai, D.H. Mayer, T. Tél
	A generalized Kac model as a dynamical system
	Z. Naturforsch 49a, 1212 (1994).

3.	Z. Toroczkai, Á. Péntek
	Detecting phase transition in intermittent systems by using the thermodynamical formalism
	Z. Naturforsch 49a, 1235 (1994).

2.	Á. Péntek, Z. Toroczkai, D.H. Mayer, T. Tél
	Kac Model from a dynamical system's point of view
	Phys. Rev. E 49, 2026 (1994).

1.	Z. Toroczkai, Á. Péntek
	Classification criterion for dynamical systems in intermittent chaos
	Phys. Rev. E 48, 136 (1993).

Physics Department --- College of Science --- University of Notre Dame --- Copyright©
Web Disclaimer | Web Template Design by Misha Stepanov

Web Analytics