| |
|
|
Journal Articles (peer reviewed)
97. |
P.L. Erdős, S.R. Kharel, T.R. Mezei, Z. Toroczkai
|
|
Degree-preserving graph dynamics -- a versatile process to construct random networks
|
|
submitted , (2022).
| arXiv: 2111.11994
|
96. |
F. Molnár,, A.R. Ribeiro Gomes, Sz. Horvát, M. Ercsey-Ravasz, K. Knoblauch, H. Kennedy and Z. Toroczkai
|
|
Predictability of cortico-cortical connections in the mammalian brain
|
|
to be submitted , (2022).
| bioRxiv:10.1101/2020.12.03.410803v1
|
95. |
S.R. Kharel, T.R. Mezei, S. Chung, P.L. Erdős and Z. Toroczkai.
|
|
Degree-preserving network growth
|
|
Nature Physics 18(1), 100-106 (2022).
| doi: 10.1038/s41567-021-01417-7
|
94. |
É. Czabarka, L.A. Székely, Z. Toroczkai, S. Walker
|
|
An algebraic Monte-Carlo algorithm for the Bipartite Partition Adjacency Matrix realization problem.
|
|
Algebraic Statistics 12(2), 1150124 (2021).
| doi: 10.2140/astat.2021.12.115
| arXiv:1708.08242 [math.CO]
|
93. |
S. Dutta, A. Khanna, H. Paik, D. Schlom, A. Raychowdhury, Z. Toroczkai, S. Datta
|
|
Ising Hamiltonian Solver using Stochastic Phase-Transition Nano-Oscillators
|
|
Nature Electronics 4 502-512 (2021).
| doi: 10.1038/s41928-021-00616-7
| arXiv:2007.12331 [cond-mat.mes-hall]
|
92. |
F. Molnár, S. R. Kharel, X. Hu, Z. Toroczkai
|
|
Accelerating a continuous-time analog SAT solver using GPUs
|
|
Computer Physics Communications 256 107469 (2020).
| doi: 10.1016/j.cpc.2020.107469
|
91. |
S. Dutta, A. Khanna, J. Gomez, K. Ni, Z. Toroczkai, S. Datta.
|
|
Experimental Demonstration of Phase Transition Nano-Oscillator Based Ising Machine.
|
|
2019 IEEE International Electron Devices Meeting (IEDM19), San Francisco, CA, USA, 37.8.1-37.8.4 (2019).
| doi: 10.1109/IEDM19573.2019.8993460
|
90. |
H. Yamashita, H. Suzuki, Z. Toroczkai and K. Aihara.
|
|
Bounded Continuous-Time Satisfiability Solver
|
|
Proceedings of the 2019 International Symposium on Nonlinear Theory and its Applications (NOLTA2019) 436-439 (2019).
| access paper here
|
89. |
B. Molnár, F. Molnár, M. Varga, Z. Toroczkai, M. Ercsey-Ravasz.
|
|
A continuous-time Max-SAT solver with high analog performance.
|
|
Nature Communications, 9, 4864 (2018).
| doi:10.1038/s41467-018-07327-2
|
88. |
R. Gamanut, H. Kennedy, Z. Toroczkai, M. Ercsey-Ravasz, D.C. Van Essen, K. Knoblauch
and A. Burkhalter.
|
|
The Mouse Cortical Connectome, Characterized by an Ultra-Dense Cortical Graph, Maintains Specificity by Distinct Connectivity Profiles
|
|
Neuron 97, 698-715 (2018).
| doi:10.1016/j.neuron.2017.12.037
|
87. |
P.L. Erdős, I. Miklós, Z. Toroczkai.
|
|
New classes of degree sequences with fast mixing swap Markov chain sampling.
|
|
Combinatorics Probability and Computing 27(2),
186-207 (2018).
| doi:10.1017/S0963548317000499
| arXiv:1601.08224 [cs.DM, math.CO]
|
86. |
X.Yin, B. Sedighi, M. Varga, M. Ercsey-Ravasz, Z. Toroczkai, X. S. Hu.
|
|
Efficient analog circuits for Boolean Satisfiability.
|
|
IEEE Transactions on Very Large Scale Integration Systems (TVLSI), 16(1), 155-167 (2018).
| doi:10.1109/TVLSI.2017.2754192
| arXiv:1606.07467 [cs.CC]
|
85. |
H.R. Noori, J. Schöttler, M. Ercsey-Ravasz, A. Cosa-Linan, M. Varga, Z. Toroczkai, R. Spanagel.
|
|
A Multi-scale Cerebral Neurochemical Connectome of the Rat Brain.
|
|
PLOS Biology 15(7), e2002612 (2017).
| doi:10.1371/journal.pbio.2002612
|
84. |
Sz. Horváth, R. Gămănuț, M. Ercsey-Ravasz, L. Magrou, B. Gămănuț, D.C. Van Essen, A. Burkhalter, K. Knoblauch, Z. Toroczkai, H. Kennedy.
|
|
Spatial Embedding and Wiring Cost Constrain the Functional Layout of the Cortical Network of Rodents and Primates
|
|
PLOS Biology 14(7), e1002512 (2016).
| doi:10.1371/journal.pbio.1002512
|
83. |
M. Varga, R. Sumi, Z. Toroczkai, M. Ercsey-Ravasz.
|
|
Order-to-chaos transition in the hardness of random Boolean satisfiability problems.
|
|
Phys. Rev. E 93, 052211 (2016).
| arXiv:1602.05152 [cs.CC, cond-mat.stat-mech]
|
82. |
C. Orsini, M.M. Dankulov, P. Colomer-de-Simon, A. Jamakovic, P. Mahadevan, A. Vahdat,
K.E. Bassler, Z. Toroczkai, M. Boguna, G. Caldarelli, S. Fortunato, D. Krioukov
|
|
Quantifying randomness in real networks.
|
|
Nature Communications 6, 8627 (2015).
| doi:10.1038/ncomms9627
| arXiv:1505.07503 [physics.soc-ph]
|
81. |
K.E. Bassler, C.I. Del Genio, P.L. Erdős, I. Miklós, Z. Toroczkai.
|
|
Exact sampling of graphs with prescribed degree correlations.
|
|
New J. Phys. 17, 083052 (2015).
| doi:10.1088/1367-2630/17/8/083052
| arXiv:1503.06725 [cs.DM, cond-mat.stat-mech, cs.DS, math.CO, physics.soc-ph]
|
79. |
P. L. Erdős, I. Miklós and Z. Toroczkai.
|
|
A decomposition based proof for fast mixing of a Markov chain over balanced
realizations of a joint degree matrix.
|
|
SIAM J. Discr. Math.
29(1), 481-499 (2015).
|doi:10.1137/130929874
| arxiv:1307.5295 [math.CO]
|
78. |
Y. Ren, M. Ercsey-Ravasz, P. Wang, M.C. Gonzalez, Z. Toroczkai.
|
|
Predicting flows in spatial networks using a radiation model based on temporal ranges.
|
|
Nature Communications 5, 5347 (2014).
|doi: 10.1038/ncomms6347
|arXiv:1410.4849 [physics.soc-ph]
|
77. |
N.T. Markov, M.M. Ercsey-Ravasz, A.R. Ribeiro Gomes,
C. Lamy, L. Magrou, J. Vezoli, P. Misery, A. Falchier, R. Quilodran, M. A. Gariel, J. Sallet,
R. Gamanut, C. Huissoud, S. Clavagnier, P. Giroud, D. Sappey-Marinier, P. Barone, C. Dehay,
Z. Toroczkai, K. Knoblauch, D. C. Van Essen and H. Kennedy.
|
|
A weighted and directed interareal connectivity
matrix for macaque cerebral cortex.
|
|
Cereb. Cortex, 24(1) 17-36 (2014)
|
76. |
N.T. Markov, M. Ercsey-Ravasz, D.C. Van Essen,
K. Knoblauch, Z. Toroczkai and H. Kennedy.
|
|
Cortical high-density counter-stream architectures.
|
|
Science 342(6158), 1238406 (2013).
|
75. |
M. Ercsey-Ravasz, N.T. Markov, C. Lamy, D.C. Van Essen, K. Knoblauch, Z. Toroczkai,
and H. Kennedy.
|
|
A predictive network model of cerebral cortical connectivity based on a
distance rule.
|
|
Neuron 80(1), 184-197 (2013).
|
74. |
H. Kennedy, K. Knoblauch and Z. Toroczkai.
|
|
Data coherence and completion actually do count for interareal cortical network
|
|
Neuroimage 80, 37-45 (2013).
|
73. |
N.T. Markov, M. Ercsey-Ravasz, C. Lamy, A.R. Ribeiro Gomes, L. Magrou, P. Misery,
P. Giroud, P. Barone, C. Dehay, Z. Toroczkai, K. Knoblauch, D.C. Van Essen, H.
Kennedy.
|
|
The role of distance on the specicity of inter-areal connectivity in the
macaque cerebral cortex
|
|
Proc. Natl. Acad. Sci. USA 110(13), 5187-5192 (2013).
|
72. |
C. Wang, O. Lizardo, D. Hachen, A. Strathman, Z. Toroczkai, and N. V. Chawla.
(2013) in press.
|
|
A dyadic reciprocity index for repeated interaction networks.
|
|
Network Science (CUP) 1(01), 31-48 (2013).
|
70. |
M. Ercsey-Ravasz, R. Lichtenwalter, N.V. Chawla and Z. Toroczkai
|
|
Range-limited centrality measures in non-weighted and weighted complex networks
|
|
Phys. Rev. E. 85, 066103 (2012).
arxiv.org/1111.5382
|
69. |
M. Ercsey-Ravasz, Z. Toroczkai, Z. Lakner and J. Baranyi.
|
|
Complexity of the International Agro-Food Trade Network and its
Impact on Food Safety.
|
|
PLoS ONE 7(5), e37810 (2012).
doi:10.1371/journal.pone.0037810 .
|
68. |
H. Kim, C.I. Del Genio, K.E. Bassler and Z. Toroczkai
|
|
Constructing and sampling directed graphs with given degree sequence
|
|
New J. Phys.
14, 023012 (2012).
arxiv.org/1109.4590
|
67. |
M. Ercsey-Ravasz and Z. Toroczkai
|
|
Optimization hardness as transient chaos in an analog approach to
constraint satisfaction.
|
|
Nature Physics 7, 966-970 (2011) |
doi:10.1038/nphys2105,
cover-page article.
arxiv.org: 1208.0526v1
|
66. |
N.T. Markov, P. Misery, A. Falchier, C. Lamy, J. Vezoli,
R. Quilodran, P. Giroud, M.A. Gariel, M. Ercsey-Ravasz, L.J. Pilaz,
C. Huissoud, P. Barone, C. Dehay, Z. Toroczkai, D.C. Van Essen, H. Kennedy, K. Knoblauch
|
|
Weight concistency specifies regularities of cortical networks.
|
|
Cereb Cortex 21, 1254-1272 (2011)
doi:10.1093/cercor/bhq201
|
65. |
A. Asztalos and Z. Toroczkai
|
|
Network discovery by generalized random walks
|
|
Europhysics Letters 92, 50008 (2010).
|
64. |
M. Ercsey-Ravasz and Z. Toroczkai
|
|
Centrality scaling in large networks
|
|
Phys. Rev. Lett. 105, 038701 (2010).
|
63. |
C.I. Del Genio, H. Kim, Z. Toroczkai and K.E. Bassler
|
|
Efficient and exact sampling of simple graphs with given arbitrary degree sequence
|
|
PLoS ONE 5(4), e10012 (2010).
doi:10.1371/journal.pone.0010012.
|
62. |
P.L. Erdös, I. Miklós, Zoltán Toroczkai
|
|
A simple Havel-Hakimi type algorithm to realize graphical degree sequences of directed graphs
|
|
The Electronic Journal of Combinatorics 17(1), R66 (2010).
|
61. |
H. Kim, Z. Toroczkai, I. Miklós, P.L. Erdös and L. Székely
|
|
Degree-based graph construction
|
|
J. Phys. A: Math. Theor. 42, 392001 (2009). Fast Track Communication.
|
60. |
A.L. Pastore y Piontti, C.E. La Rocca, Z. Toroczkai, L.A. Braunstein, P.A. Macri and E.D. López
|
|
Using relaxational dynamics to reduce network congestion
|
|
New J. Phys. 10, 093007 (2008).
|
59. |
Z. Toroczkai, B. Kozma, K.E. Bassler, N.W. Hengartner, G. Korniss
|
|
Gradient networks
|
|
J. Phys. A: Math. Theor. 41, 155103 (2008).
|
58. |
A.E. Motter, Z. Toroczkai
|
|
Introduction: Optimization in networks
|
|
Chaos 17, 026101 (2007).
|
57. |
H. Guclu, G. Korniss, Z. Toroczkai
|
|
Extreme fluctuations in noisy task-completion landscapes on scale-free networks
|
|
Chaos 17, 026104 (2007).
|
56. |
S. Sreenivasan, R. Cohen, E. Lopez, Z. Toroczkai, H.E. Stanley
|
|
Structural bottlenecks for communication in networks
|
|
Phys.Rev.E. 75, 036105 (2007).
|
55. |
Z. Toroczkai, H. Guclu
|
|
Proximity Networks and Epidemics
|
|
Physica A 378, 68 (2007).
|
54. |
B. Danila, Y. Yu, S. Earl, J.A. Marsh, Z. Toroczkai, K.E. Bassler
|
|
Congestion-gradient driven transport on complex networks
|
|
Phys.Rev.E 74, 046114 (2006).
|
53. |
H. Guclu, G. Korniss, M. A. Novotny, Z. Toroczkai, and Z. Rácz
|
|
Synchronization landscapes in small-world-connected computer networks
|
|
Phys.Rev.E 73, 066115 (2006).
|
52. |
Z. Toroczkai and S. Eubank
|
|
Agent-based Modeling as a Decision Making Tool: How to Halt a Smallpox Epidemic. Frontiers of Engineering, The National Academies
|
|
Frontiers of Engineering, Reports on Leading-edge
Engineering from the 2005 Symposium, National Academy of Engineering, 99-107 (2005);
reprinted as feature article in
The Bridge 35(4), 22 (2005);
|
51. |
Z. Toroczkai and K.E. Bassler
|
|
Network Dynamics: Jamming is Limited in Scale-free Systems
|
|
Nature 428, 716 (2004).
|
50. |
S. Eubank, H. Guclu, V.S.A. Kumar, M. Marathe, A. Srinivasan, Z. Toroczkai, N. Wang
|
|
Modelling disease outbreaks in realistic urban social networks
|
|
Nature 429, 180 (2004).
|
49. |
T. Tél, T. Nishikawa, A.E. Motter, C. Grebogi,
and Z. Toroczkai.
|
|
Universality in active chaos
|
|
Chaos 14, 72 (2004).
|
48. |
M. Anghel, Z. Toroczkai, K.E. Bassler, G. Korniss
|
|
Competition-driven Network Dynamics: Emergence of a Scale-free
Leadership Structure and Collective Efficiency
|
|
Phys.Rev.Lett. 92, 058701 (2004).
|
47. |
I.J. Benczik, Z. Toroczkai and T. Tél
|
|
Advection of Finite-size Particles in Open Flows
|
|
Phys.Rev.E. 67, 036303 (2003).
|
46. |
I. Scheuring, T. Czárán, P. Szabó, G. Károlyi, and Z. Toroczkai
|
|
Spatial models of prebiotic evolution: soup before pizza?
|
|
Origins of Life and Evolution of the Biosphere 3, 319 (2003).
|
45. |
G. Korniss, M.A. Novotny, H. Guclu, Z. Toroczkai, P.A. Rikvold
|
|
Suppressing Roughness of Virtual Times in Parallel Discrete-Event Simulations
|
|
Science 299, 677 (2003).
|
44. |
I.Scheuring, G.Károlyi, Z. Toroczkai, T. Tél, and Á. Péntek
|
|
Competing populations in flows with chaotic mixing
|
|
Theor.Pop.Biol. 63(#2), 77 (2003).
|
43. |
J.M. Finn, J.D. Goette, Z. Toroczkai, M. Anghel and B.P. Wood
|
|
Estimation of Entropies and Dimensions by Nonlinear Symbolic Time Series Analysis
|
|
Chaos 13(#2), 444 (2003).
|
42. |
I.J. Benczik, Z. Toroczkai and T. Tél.
|
|
Selective Sensitivity of Open Chaotic Flows on Inertial Tracer Advection:
Catching Particles with a Stick
|
|
Phys.Rev.Lett. 89, 164501 (2002).
|
41. |
S. Das Sarma, P.P. Chatraphorn, Z. Toroczkai
|
|
Universality class of discrete solid-on-solid limited mobility
nonequilibrium growth models for kinetic surface roughening
|
|
Phys.Rev.E 65, 0366144 (2002).
|
40. |
Z. Toroczkai, T. Tél
|
|
Introduction: Active chaotic flow.
|
|
Chaos 12(2), 372 (2002).
|
39. |
Z. Toroczkai
|
|
Topological classification of the
Horton-Strahler index on binary trees
|
|
Phys.Rev.E 65, 016130 (2001).
|
38. |
G. Korniss, M.A. Novotny, P.A. Rikvold, H. Guclu and Z. Toroczkai
|
|
Going Through Rough Times: from Non-equilibrium
Surface Growth to Algorithmic Scalability
|
|
Materials Research Society Symposium Proceedings Series 700, 297 (2002).
|
37. |
G. Santoboni, T. Nishikawa, Z. Toroczkai and C. Grebogi
|
|
Autocatalytic reactions of phase distributed active particles
|
|
Chaos 12, 408 (2002).
|
36. |
M. Chertkov, I. Gabitov, P. Lushnikov, J. Moeser, and Z. Toroczkai
|
|
Pinning method of pulse confinement in optical fiber with random dispersion
|
|
J.Opt.Soc.Am. B 19, 42538 (2002).
|
35. |
T. Nishikawa, Z. Toroczkai, C. Grebogi and T. Tél
|
|
Finite size effects on active chaotic advection
|
|
Phys.Rev.E 65, 026216 (2002).
|
34. |
P. Punyindu, Z. Toroczkai, S. Das Sarma
|
|
Epitaxial Mounding in Limited-Mobility Models of Surface Growth
|
|
Phys.Rev.B 64, 205407 (2001).
|
33. |
Z. Toroczkai, G. Károlyi, Á. Péntek, T. Tél and I. Scheuring
|
|
Autocatalytic Reactions in Systems with Hyperbolic Mixing:
Exact Results for the Active Baker Map
|
|
J.Phys.A: Math.Gen. 34, 5215 (2001).
|
32. |
Z. Toroczkai, G. Korniss
|
|
Comment on "Extremal-Point densities of
interface fluctuations in a quenched random medium"
|
|
Phys.Rev.E 64, 048101 (2001).
|
31. |
T. Nishikawa, Z. Toroczkai, and C. Grebogi
|
|
Advective coalescence in chaotic flows
|
|
Phys.Rev.Lett. 87, 038301 (2001).
|
30. |
I. Miklós and Z. Toroczkai
|
|
An improved model for statistical alignment
|
|
Lecture Notes In Computer Science 2149, 1 (2001).
|
29. |
G. Károlyi, Á. Péntek, I. Sheuring, T. Tél, and Z.
Toroczkai
|
|
Chaotic flow: the physics of species coexistence
|
|
Proc. Natl. Acad. Sci. USA 97, 13661 (2000).
|
28. |
I. Sheuring, G. Károlyi, Á. Péntek, T. Tél, Z. Toroczkai
|
|
A model for resolving the plankton
paradox: coexistence in open flows
|
|
Freshwater Biology 45, 123 (2000).
|
27. |
Z. Toroczkai, G. Korniss, S. Das Sarma, R. K. P. Zia
|
|
Extremal-point densities of interface fluctuations
|
|
Phys.Rev.E 62, 276 (2000).
|
26. |
G. Korniss, Z. Toroczkai, M.A. Novotny, P.A. Rikvold
|
|
From massively parallel algorithms and fluctuating time horizons to non-equilibrium surface growth
|
|
Phys.Rev.Lett. 84, 1351 (2000).
|
25. |
S. Das Sarma, P. Punyindu, Z.Toroczkai
|
|
Nonuniversal mound formation in nonequilibrium surface growth
|
|
Surf. Sci. Letters 457, L369 (2000).
|
24. |
T. Tél, G. Károlyi, Á. Péntek, I. Sheuring, Z. Toroczkai, C. Grebogi, J. Kadtke
|
|
Chaotic advection, diffusion, and reactions in open flows
|
|
Chaos 10, 89 (2000).
|
23. |
Z. Toroczkai, E.D. Williams
|
|
Nanoscale fluctuations at solid surfaces
|
|
Physics Today 52, 24 (1999).
|
22. |
G. Károlyi, Á. Péntek, I. Sheuring, T. Tél, Z. Toroczkai,
C. Grebogi, J. Kadtke
|
|
Fractality, chaos, and reactions in imperfectly mixed open hydrodynamical flows
|
|
Physica A 274, 120 (1999).
|
21. |
Z. Toroczkai, T. J. Newman, S. Das Sarma
|
|
Sign-time distributions for interface growth
|
|
Phys.Rev.E. 60, R1115 (1999).
|
20. |
G. Károlyi, Á. Péntek, Z. Toroczkai, T. Tél, C. Grebogi
|
|
Chemical or biological activity in open chaotic flows
|
|
Phys.Rev.E. 59, 5468 (1999).
|
19. |
T. J. Newman, Z. Toroczkai
|
|
Diffusive persistence and the "sign-time" distribution
|
|
Phys.Rev.E. 58, R2685 (1998).
|
18. |
R.K.P. Zia, Z. Toroczkai
|
|
Random walk with a hop-over site: A novel approach to tagged diffusion and its applications
|
|
J.Phys.A: Math.Gen. 31, 9667 (1998).
|
17. |
Z. Toroczkai, G. Károlyi, T. Tél, Á. Péntek, C.Grebogi
|
|
Advection of active particles in open chaotic flows
|
|
Phys. Rev. Lett. 80, 500 (1998).
|
16. |
Z. Toroczkai, G. Korniss, B. Schmittmann, R.K.P. Zia
|
|
Brownian-vacancy mediated disordering dynamics
|
|
Europhys.Lett. 40, 281 (1997).
|
15. |
Z. Toroczkai
|
|
The Brownian vacancy driven walk
|
|
Int. J. Mod. Phys. B 11, 3343 (1997).
|
14. |
Z. Toroczkai, R.K.P. Zia
|
|
Periodic one-dimensional hopping model with one mobile directional impurity
|
|
J. Stat. Phys. 87, 545 (1997).
|
13. |
Z. Toroczkai, G. Károlyi, Á. Péntek, T. Tél, C. Grebogi, J.A. Yorke
|
|
Wada dye boundaries in open hydrodynamical flows
|
|
Physica A239, 235 (1997).
|
12. |
Á. Péntek, T. Tél, Z. Toroczkai
|
|
Transient chaotic mixing in open hydrodynamical flows
|
|
Int. J. Bif. Chaos 6, 2619 (1996).
|
11. |
Á. Péntek, J.B. Kadtke, Z. Toroczkai
|
|
Stabilizing chaotic vortex trajectories: An example of high dimensional control
|
|
Phys. Lett. A224, 85 (1996).
|
10. |
Z. Toroczkai, R.K.P. Zia
|
|
A model for electrophoresis of polymers with impurities: Exact distribution for a steady state
|
|
Phys. Lett. A217, 97 (1996).
|
9. |
B. Sass, Z. Toroczkai
|
|
Continuous extension of the geometric control method
|
|
J. Phys. A: Math.Gen. 29, 3545 (1996).
|
8. |
Á. Péntek, Z. Toroczkai, T. Tél, C. Grebogi, J.A. Yorke
|
|
Fractal boundaries in open hydrodynamical flows:Signatures of chaotic saddles
|
|
Phys. Rev. E 51, 4076 (1995).
|
7. |
Á. Péntek, Z. Toroczkai
|
|
Chaotic advection in the velocity field of leapfrogging vortex pairs
|
|
J. Phys. A: Math.Gen. 28, 2191 (1995).
|
6. |
Á. Péntek, Z. Toroczkai
|
|
Fractal tracer patterns in open hydrodynamical flows: The case of leapfrogging
vortex pairs
|
|
Fractals 3, 33 (1995).
|
5. |
Z. Toroczkai
|
|
Geometric method for stabilizing unstable periodic orbits
|
|
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